Gluten-free blueberry muffins with a moist crumb and a subtle lemon flavor—these gluten-free lemon blueberry muffins are easy to love and reliable to bake.

Perfecting gluten-free blueberry muffins took several attempts. I tried adapting a favorite wheat recipe and testing other versions without success. After reading techniques in the book BakeWise and adapting one of its blueberry muffin approaches for gluten-free ingredients, I finally landed on a recipe that produced the tender, moist crumb I wanted.

The recipe I developed keeps the lemon flavor subtle by using lemon zest rather than juice. The zest adds a fresh brightness without making the muffins tangy. A fine zester makes this easy and consistent.
I also like a light lemon-sugar topping for an extra hint of citrus and a pleasant crunch. These muffins are just sweet enough with tender interiors and a slightly crisp top. They travel well and store nicely in an airtight container or the freezer.

These are my go-to gluten-free lemon blueberry muffins now. If you prefer no lemon, simply omit the zest and leave everything else the same. Fresh blueberries are recommended for best texture and appearance; frozen berries work but can tint the batter.
What follows is the recipe presented clearly for home bakers, with ingredient amounts and step-by-step instructions so you can make a batch of 12 muffins.
Gluten-free Lemon Blueberry Muffin recipe:
Gluten-free Lemon Kissed Blueberry Muffins
Gluten-free blueberry muffins with just a touch of lemon.
15 minutes
16 minutes
5 minutes
36 minutes
Ingredients
- 2 cups good gluten-free flour blend
- 1 tsp. xanthan gum (omit if your flour blend already contains a gum)
- 2 tsp. baking powder
- 1/2 tsp. salt
- 1 1/4 cups sugar
- 1 egg
- 1/2 cup oil (mild-flavored, your choice)
- 1/2 cup buttermilk
- 1/2 cup sour cream (natural style recommended)
- 1 tsp. vanilla
- 1 tsp. lemon zest
- 1 1/2 cups blueberries (fresh recommended, frozen ok)
Topping:
- 1/4 cup sugar
- 1 tsp. lemon zest
Instructions
- Line a 12-cup muffin pan with paper liners and set aside.
- Preheat the oven to 400° F (204° C).
- In a large bowl, whisk together the gluten-free flour blend, xanthan gum (if using), baking powder, salt, and sugar until evenly combined.
- In a separate bowl, beat the egg with the oil, buttermilk, sour cream, vanilla, and lemon zest until smooth.
- Pour the wet ingredients into the dry ingredients and mix until just combined. Avoid overmixing.
- Gently fold in the blueberries with a rubber spatula. If using frozen berries, expect some purple streaking in the batter.
- Using a large scoop, fill each paper liner mostly full to make 12 muffins.
- In a small bowl, combine 1/4 cup sugar with 1 teaspoon lemon zest and sprinkle evenly over the tops of the muffins.
- Bake at 400° F for 16–20 minutes, or until the tops are lightly browned and a toothpick inserted into the center comes out with moist crumbs attached.
- Let the muffins cool in the pan for a few minutes, then transfer to a cooling rack. Store at room temperature in an airtight container for a few days or freeze for longer storage.
Notes
If your gluten-free flour blend already contains xanthan gum or guar gum, omit the xanthan gum called for in the ingredient list.
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I hope you enjoy baking and sharing these muffins.